Data Processing
- scarches.dataset.label_encoder(adata, encoder, condition_key=None)[source]
Encode labels of Annotated adata matrix. :param adata: Annotated data matrix. :type adata: : ~anndata.AnnData :param encoder: dictionary of encoded labels. :type encoder: Dict :param condition_key: column name of conditions in adata.obs data frame. :type condition_key: String
- Returns:
labels (~numpy.ndarray) – Array of encoded labels
label_encoder (Dict) – dictionary with labels and encoded labels as key, value pairs.